Purine Metabolism
SMPDB_ID
SMP0000050
PW_ID
PW000052
图片
主题
Metabolic
描述
Purines are heterocyclic aromatic organic compounds, consisting of a pyrimidine ring fused to an imidazole ring. Purines, including substituted purines, are the most widely distributed kind of nitrogen-containing heterocycle in nature. The two most important purines are adenine and guanine. Other notable purines are hypoxanthine, xanthine, theobromine, caffeine, uric acid and isoguanine. Purines are found in a number of other important biomolecules, such as ATP, GTP, cyclic AMP, NADH, and coenzyme A. This pathway depicts a number of processes including purine nucleotide biosynthesis, purine degradation and purine salvage. The major site of purine nucleotide synthesis is in the liver. Synthesis of the purine nucleotides begins with PRPP and leads to the first fully formed nucleotide, inosine 5'-monophosphate (IMP). IMP synthesis begins with 5-phospho-α-ribosyl-1-pyrophosphate, PRPP. Through a series of reactions utilizing ATP, tetrahydrofolate (THF) derivatives, glutamine, glycine and aspartate this pathway yields IMP. The rate limiting reaction is catalyzed by glutamine PRPP amidotransferase which drives the reaction with PRPP and glutamine yielding 5-phosphoribosylamine (PRA). 5-phosphoribosylamine is converted to glycinamide ribotide (GAR) then to formyglycinamide ribotide (FGAR). This set of reactions is catalyzed by a trifunctional enzyme containing GAR synthetase, GAR transformylase and AIR synthetase. FGAR is converted to formylglycinamidine-ribonucleotide (FGAM) by formylglycinamide synthase. FGAM is then converted by aminoimidzaole ribotide synthase to 5-aminoimidazole ribotide (AIR) then carboxylated by aminoimidazole ribotide carboxylase to carboxyaminoimidazole ribotide (CAIR). CAIR is then converted to succinylaminoimidazole carboxamide ribotide (SAICAR) by succinylaminoimidazole carboxamide ribotide synthase followed by conversion to AICAR (via adenylsuccinate lyase) then to FAICAR (via aminoimidazole carboxamide ribotide transformylase). FAICAR is finally converted to inosine monophosphate (IMP) by IMP cyclohydrolase. Because of the complexity of this synthetic process, the purine ring is actually composed of atoms derived from many different molecules. The N1 atom arises from the amine group of Asp, the C2 and C8 atoms originate from formate, the N3 and N9 atoms come from the amide group of Gln, the C4, C5 and N7 atoms come from Gly and the C6 atom comes from CO2. IMP represents a branch point for purine biosynthesis, because it can be converted into either AMP or GMP through two distinct reaction pathways. AMP is generated from IMP via adenylsuccinate synthetase (which adds aspartate) and adenylsuccinate lyase. GMP is generated via the action of IMP dehydrogenase and GMP synthase. Catabolism of purine nucleotides ultimately leads to the production of uric acid. Beginning from AMP, the enzymes AMP deaminase and nucleotidase work in concert to generate inosine. Alternately, AMP may be dephosphorylate by nucleotidase and then adenosine deaminase (ADA) converts the free adenosine to inosine. The enzyme purine nucleotide phosphorylase (PNP) converts inosine to hypoxanthine, while xanthine oxidase converts hypoxanthine to xanthine and finally to uric acid. GMP and XMP can also be converted to uric acid via the action of nucleotidase, PNP, guanine deaminase and xanthine oxidase. The synthesis of nucleotides from the purine bases and purine nucleosides takes place in a series of steps known as the salvage pathways. The free purine bases, adenine, guanine, and hypoxanthine, can be reconverted to their corresponding nucleotides by phosphoribosylation. Two key transferase enzymes are involved in the salvage of purines: adenosine phosphoribosyltransferase (APRT), which catalyzes the conversion of adenine to AMP and hypoxanthine-guanine phosphoribosyltransferase (HGPRT), which catalyzes the conversion of hypoxanthine to IMP.
代谢物
SMPDB ID代谢物id代谢物的名字
SMP0000050 PW_C008133 Fe3+
SMP0000050 PW_C040707 Disulfide
SMP0000050 PW_C001801 5-Aminoimidazole-4-carboxamide
SMP0000050 PW_C000121 Inosine triphosphate
SMP0000050 PW_C001846 IDP
SMP0000050 PW_C001799 Heme
SMP0000050 PW_C007218 Guanosine 2',3'-cyclic phosphate
SMP0000050 PW_C001177 Deoxyadenosine triphosphate
SMP0000050 PW_C000724 Deoxyadenosine monophosphate
SMP0000050 PW_C001161 dADP
SMP0000050 PW_C000041 cAMP
SMP0000050 PW_C000068 Deoxyadenosine
SMP0000050 PW_C000024 Adenine
SMP0000050 PW_C000034 Adenosine
SMP0000050 PW_C000413 Adenylsuccinic acid
SMP0000050 PW_C000050 Deoxyinosine
SMP0000050 PW_C000195 Uric acid
SMP0000050 PW_C000964 FAD
SMP0000050 PW_C001783 Hydrogen peroxide
SMP0000050 PW_C001065 Oxygen
SMP0000050 PW_C000102 Hypoxanthine
SMP0000050 PW_C000127 Inosine
SMP0000050 PW_C000203 Xanthosine
SMP0000050 PW_C000146 NADPH
SMP0000050 PW_C000143 NADP
SMP0000050 PW_C000457 Potassium
SMP0000050 PW_C001144 NADH
SMP0000050 PW_C000721 NAD
SMP0000050 PW_C001196 Xanthylic acid
SMP0000050 PW_C000114 Inosinic acid
SMP0000050 PW_C001111 Phosphoribosyl formamidocarboxamide
SMP0000050 PW_C001168 AICAR
SMP0000050 PW_C000088 Fumaric acid
SMP0000050 PW_C000637 SAICAR
SMP0000050 PW_C000123 L-Aspartic acid
SMP0000050 PW_C001316 Carbon dioxide
SMP0000050 PW_C002699 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
SMP0000050 PW_C000955 5-Aminoimidazole ribonucleotide
SMP0000050 PW_C000791 Phosphoribosylformylglycineamidine
SMP0000050 PW_C001007 5'-Phosphoribosyl-N-formylglycinamide
SMP0000050 PW_C001221 Tetrahydrofolic acid
SMP0000050 PW_C000774 10-Formyltetrahydrofolate
SMP0000050 PW_C001355 Glycineamideribotide
SMP0000050 PW_C000078 Glycine
SMP0000050 PW_C000500 L-Glutamine
SMP0000050 PW_C000095 L-Glutamic acid
SMP0000050 PW_C000882 5-Phosphoribosylamine
SMP0000050 PW_C001191 D-Ribose 5-phosphate
SMP0000050 PW_C000032 Adenosine monophosphate
SMP0000050 PW_C000914 Adenosine diphosphate ribose
SMP0000050 PW_C001005 Zinc (II) ion
SMP0000050 PW_C000035 Ammonia
SMP0000050 PW_C000198 Xanthine
SMP0000050 PW_C001042 Deoxyribose 1-phosphate
SMP0000050 PW_C001146 Ribose 1-phosphate
SMP0000050 PW_C001441 Phosphoric acid
SMP0000050 PW_C000087 Guanosine
SMP0000050 PW_C000190 Phosphoribosyl pyrophosphate
SMP0000050 PW_C000086 Guanine
SMP0000050 PW_C000170 Pyrophosphate
SMP0000050 PW_C000058 Deoxyguanosine
SMP0000050 PW_C000822 2'-Deoxyguanosine 5'-monophosphate
SMP0000050 PW_C001112 dGTP
SMP0000050 PW_C000767 dGDP
SMP0000050 PW_C000353 Calcium
SMP0000050 PW_C001104 Phosphate
SMP0000050 PW_C000423 Magnesium
SMP0000050 PW_C001034 Adenosine diphosphate
SMP0000050 PW_C000414 Adenosine triphosphate
SMP0000050 PW_C000936 Guanosine diphosphate
SMP0000050 PW_C001080 Guanosine monophosphate
SMP0000050 PW_C000986 Guanosine triphosphate
SMP0000050 PW_C001420 Water
SMP0000050 PW_C001033 Diguanosine tetraphosphate
蛋白质
SMPDB ID蛋白质id蛋白质的名字
SMP0000050 P31350 Ribonucleoside-diphosphate reductase subunit M2
SMP0000050 P23921 Ribonucleoside-diphosphate reductase large subunit
SMP0000050 P10599 Thioredoxin
SMP0000050 Q9Y233 cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A
SMP0000050 Q02153 Guanylate cyclase soluble subunit beta-1
SMP0000050 P33402 Guanylate cyclase soluble subunit alpha-2
SMP0000050 Q96PN6 Adenylate cyclase type 10
SMP0000050 Q08499 cAMP-specific 3',5'-cyclic phosphodiesterase 4D
SMP0000050 Q8NBU5 ATPase family AAA domain-containing protein 1
SMP0000050 P00568 Adenylate kinase isoenzyme 1
SMP0000050 P00813 Adenosine deaminase
SMP0000050 P23109 AMP deaminase 1
SMP0000050 P30520 Adenylosuccinate synthetase isozyme 2
SMP0000050 P47989 Xanthine dehydrogenase/oxidase
SMP0000050 P36959 GMP reductase 1
SMP0000050 P20839 Inosine-5'-monophosphate dehydrogenase 1
SMP0000050 P49915 GMP synthase [glutamine-hydrolyzing]
SMP0000050 Q9BY32 Inosine triphosphate pyrophosphatase
SMP0000050 P31939 Bifunctional purine biosynthesis protein PURH
SMP0000050 P30566 Adenylosuccinate lyase
SMP0000050 P22234 Multifunctional protein ADE2
SMP0000050 O15067 Phosphoribosylformylglycinamidine synthase
SMP0000050 P22102 Trifunctional purine biosynthetic protein adenosine-3
SMP0000050 Q06203 Amidophosphoribosyltransferase
SMP0000050 P21108 Ribose-phosphate pyrophosphokinase 3
SMP0000050 Q9UKK9 ADP-sugar pyrophosphatase
SMP0000050 Q9Y2T3 Guanine deaminase
SMP0000050 P00492 Hypoxanthine-guanine phosphoribosyltransferase
SMP0000050 P00491 Purine nucleoside phosphorylase
SMP0000050 P07741 Adenine phosphoribosyltransferase
SMP0000050 Q16854 Deoxyguanosine kinase, mitochondrial
SMP0000050 P49902 Cytosolic purine 5'-nucleotidase
SMP0000050 Q16774 Guanylate kinase
SMP0000050 Q5MY95 Ectonucleoside triphosphate diphosphohydrolase 8
SMP0000050 O75356 Ectonucleoside triphosphate diphosphohydrolase 5
SMP0000050 O75414 Nucleoside diphosphate kinase 6
SMP0000050 P50583 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]

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